STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VCPKMTValosin containing protein lysine methyltransferase. (229 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 0.990
SPATA5
Spermatogenesis associated 5.
   
 0.832
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.832
UBXN6
UBX domain protein 6.
    
 
 0.740
METTL18
Methyltransferase like 18.
   
  
 0.616
CAMKMT
Calmodulin-lysine N-methyltransferase.
      
 0.600
ETFB
Electron transfer flavoprotein subunit beta.
     
 0.548
KIN
Kin17 DNA and RNA binding protein.
      
 0.546
BCDIN3D
BCDIN3 domain containing RNA methyltransferase.
      
 0.521
METTL22
Methyltransferase like 22.
   
 
0.483
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.