STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRF1Perforin 1. (555 aa)    
Predicted Functional Partners:
GZMA
Granzyme A.
   
 0.883
ENSSSUP00005035164
annotation not available
   
  
 0.853
CD8A
CD8a molecule.
   
  
 0.851
ENSSSUP00005024354
annotation not available
   
  
 0.827
ENSSSUP00005024559
annotation not available
   
  
 0.827
KLRD1
Killer cell lectin like receptor D1.
   
 
 0.805
FASLG
Fas ligand.
   
 
 0.802
IL2RB
Interleukin 2 receptor subunit beta.
   
  
 0.798
C9
Complement C9.
     
0.776
CD247
CD247 molecule.
   
  
 0.749
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.