STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF7Membrane associated ring-CH-type finger 7. (716 aa)    
Predicted Functional Partners:
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 0.670
FBXL2
F-box and leucine rich repeat protein 2.
   
  
 0.652
ENSSSUP00005008476
annotation not available
      
 0.641
ENSSSUP00005031173
annotation not available
      
 0.620
MARCHF11
Membrane associated ring-CH-type finger 11.
      
 0.611
PSME4
Proteasome activator subunit 4.
   
  
 0.610
NCK1
NCK adaptor protein 1.
   
  
 0.608
NCK2
NCK adaptor protein 2.
   
  
 0.605
MARCHF2
Membrane associated ring-CH-type finger 2.
      
 0.592
UBE2A
Ubiquitin conjugating enzyme E2 A.
    
 0.556
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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