STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNQCyclin Q. (235 aa)    
Predicted Functional Partners:
CDK9
Cyclin dependent kinase 9.
   
 0.918
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.885
CDK13
Cyclin dependent kinase 13.
    
 0.882
CDK12
Cyclin dependent kinase 12.
    
 0.882
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.703
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.676
CDC73
Cell division cycle 73.
   
 0.663
CCNH
Cyclin H.
     
 0.650
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.649
STX8
Syntaxin 8.
    
 0.627
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.