STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP7AATPase copper transporting alpha. (1499 aa)    
Predicted Functional Partners:
CCS
Copper chaperone for superoxide dismutase.
  
 0.997
PDZD11
PDZ domain containing 11.
    
 0.947
ENSSSUP00005000629
annotation not available
    
 0.919
ENSSSUP00005005118
annotation not available
    
 0.919
ENSSSUP00005015495
annotation not available
    
 0.919
ENSSSUP00005016028
annotation not available
    
 0.919
ENSSSUP00005025291
annotation not available
    
 0.919
ATP7B
ATPase copper transporting beta.
  
  
 
0.912
BDNF
Brain derived neurotrophic factor.
      
 0.789
COMMD1
Copper metabolism domain containing 1.
    
 
 0.781
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.