STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCN15Lipocalin 15. (184 aa)    
Predicted Functional Partners:
FOLH1
Folate hydrolase 1.
      
 0.635
ENSSSUP00005027307
annotation not available
      
 0.616
TM4SF20
Transmembrane 4 L six family member 20.
      
 0.537
EPS8L3
EPS8 like 3.
      
 0.537
RBP2
Retinol binding protein 2.
      
 0.520
LCN1
Lipocalin 1.
     
0.506
CDC73
Cell division cycle 73.
    
 0.500
ENSSSUP00005023702
annotation not available
    
  0.494
USH1C
USH1 protein network component harmonin.
     
 0.480
LGALS2
Galectin 2.
    
 
 0.479
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.