STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB27BRAB27B, member RAS oncogene family. (234 aa)    
Predicted Functional Partners:
RAB27A
RAB27A, member RAS oncogene family.
  
  
 
0.927
SYTL4
Synaptotagmin like 4.
   
 
 0.903
CD63
CD63 molecule.
     
 0.879
RAB3D
RAB3D, member RAS oncogene family.
  
  
0.852
ENSSSUP00005020766
annotation not available
    
 
 0.830
ENSSSUP00005009664
annotation not available
    
 0.828
ENSSSUP00005030306
annotation not available
  
  
0.783
SYTL5
Synaptotagmin like 5.
   
 
 0.772
ENSSSUP00005004428
annotation not available
     
 0.765
RAB8A
RAB8A, member RAS oncogene family.
  
  
0.755
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.