STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0023Hypothetical protein. (126 aa)    
Predicted Functional Partners:
PTH_2585
Hypothetical protein.
 
     0.776
PTH_0024
Hypothetical protein.
       0.773
PTH_1227
Uncharacterized conserved protein.
  
     0.593
PTH_2807
Hypothetical protein; Containing PIN domain.
  
     0.540
PTH_2303
Predicted nucleic acid-binding protein; Contains PIN domain.
  
     0.535
PTH_2583
Hypothetical protein; Containing partial NrfG (COG0457), FOG: TPR repeat.
  
     0.518
PTH_0403
Predicted nucleic acid-binding protein; Contains PIN domain.
 
     0.489
PTH_0260
Hypothetical protein.
  
     0.471
CumB
Cytosine/adenosine deaminases; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
     
 0.447
GltB-2
Glutamate synthase domain 2.
       0.424
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.