Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTH_0028Containing COG4624, iron only hydrogenase large subunit, C-terminal domain; COG2000, predicted Fe-S protein; and PAS domain. (578 aa)    
Predicted Functional Partners:
PTH_0027
Hypothetical protein.
 
 
 0.975
NuoF
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
 
 
 0.961
NuoF-2
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
 
 
 0.959
NuoF-3
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
   
 
 0.956
PTH_0029
Sigma factor PP2C-like phosphatase.
 
     0.934
PTH_1816
Uncharacterized conserved protein.
  
    0.745
HypB
Ni2+-binding GTPase; Involved in regulation of expression and maturation of urease and hydrogenase.
  
    0.731
NtrB-2
Signal transduction histidine kinase; Nitrogen specific.
 
      0.706
MmcM
Related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
     
 0.675
PTH_2010
NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit, chain G.
 
 
 
0.665
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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