STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IclRTranscriptional regulator. (235 aa)    
Predicted Functional Partners:
DUR1
Allophanate hydrolase subunit 1.
  
    0.662
PTH_1187
Hypothetical protein.
  
    0.632
UhpC
Sugar phosphate permease.
 
   
 0.621
PTH_0031
Hypothetical protein; Containing partial COG0388, predicted amidohydrolase.
 
     0.608
FadR
Transcriptional regulator.
 
  
 0.577
AraH
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  
     0.512
FadR-2
Transcriptional regulator.
 
  
 0.498
PTH_0029
Sigma factor PP2C-like phosphatase.
       0.468
PutP-2
Na+/proline symporter.
  
    0.451
PTH_1188
Uncharacterized proteins, homologs of lactam utilization protein B; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.450
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.