STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UhpCSugar phosphate permease. (316 aa)    
Predicted Functional Partners:
PTH_0031
Hypothetical protein; Containing partial COG0388, predicted amidohydrolase.
  
  
 0.782
ProP-2
Permeases of the major facilitator superfamily.
  
  
 0.697
LldP
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
   
 0.655
IclR
Transcriptional regulator.
 
   
 0.621
PTH_0973
uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase; COG0007 CysG and COG1587 HemD.
  
  
 0.518
Tdh-3
Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
  
 0.488
Tdh-2
Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
    0.467
GlpC-2
Fe-S oxidoreductase.
  
  
 0.447
PTH_0690
Hypothetical membrane protein.
  
  
 0.440
PTH_2806
Hypothetical transcriptional regulator; Containing effector domain of the CAP family of transcription factors, Sigma-54 interaction domain and partial NapH (COG0348), Polyferredoxin.
  
  
 0.400
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.