STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0033Hypothetical protein. (97 aa)    
Predicted Functional Partners:
PTH_2390
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.853
PTH_0034
Hypothetical protein.
     
 0.842
PTH_0540
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.578
PTH_0694
Predicted nucleic acid-binding protein; Contains PIN domain.
  
     0.540
PTH_0402
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.500
PTH_0396
Hypothetical protein.
 
   
 0.453
PTH_0147
Predicted ATPase; AAA+ superfamily.
  
     0.440
OmpR
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.413
PTH_0036
Hypothetical membrane-associated sensory histidine kinase; Containing COG5002, VicK, signal transduction histidine kinase domain.
       0.413
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.