STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SalYABC-type antimicrobial peptide transport system, permease component. (405 aa)    
Predicted Functional Partners:
SalX
ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.999
SalX-3
ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.996
SalX-2
ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.992
AcrA
Membrane-fusion protein.
 
  
 0.952
CbiO
ABC-type cobalt transport system, ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
    0.901
FtsE
Predicted ATPase; Part of the ABC transporter FtsEX involved in cellular division.
 
    
 0.901
GlnQ
ABC-type polar amino acid transport system, ATPase component.
 
      0.899
TauB
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
      0.898
CcmA-5
ABC-type multidrug transport system, ATPase component.
 
    
 0.895
CbiO-7
ABC-type cobalt transport system, ATPase component.
 
 
    0.894
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.