STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0082Hypothetical protein; Containing partial COG1216 predicted glycosyltransferases. (275 aa)    
Predicted Functional Partners:
PTH_0083
Hypothetical protein.
 
    0.776
PTH_0147
Predicted ATPase; AAA+ superfamily.
  
     0.506
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.500
PTH_1926
Uncharacterized protein; Predicted to be involved in DNA repair (RAMP superfamily).
  
     0.444
CitA
Signal transduction histidine kinase; Regulating citrate/malate metabolism.
  
 
   0.417
PTH_0088
Hypothetical protein; Containing LysM domain.
 
     0.411
PTH_1927
Uncharacterized protein; Predicted to be involved in DNA repair (RAMP superfamily).
  
     0.405
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.