STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NtrBSignal transduction histidine kinase; Nitrogenspecific. (356 aa)    
Predicted Functional Partners:
CheY
FOG: CheY-like receiver.
 
 
 0.832
CheR
Methylase of chemotaxis methyl-accepting proteins.
    
 0.827
OmpR-7
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 
 0.787
OmpR-6
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 
 0.783
CheY-3
FOG: CheY-like receiver.
  
     0.774
OmpR-2
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
 
 0.770
OmpR-8
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
 
 0.768
PTH_0245
Hypothetical protein; Containing OmpR response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (COG0745).
  
 
 
 0.767
OmpR-9
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 
 0.763
OmpR-3
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
 
 0.755
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.