Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTH_0108Hypothetical membrane protein. (188 aa)    
Predicted Functional Partners:
FliS
Flagellin-specific chaperone FliS.
  
  
 0.663
FliD
Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.649
CheW
Chemotaxis signal transduction protein.
  
  
 0.620
PTH_2113
Hypothetical protein.
  
  
 0.619
FlgK
Flagellar hook-associated protein.
  
  
 0.614
CheR
Methylase of chemotaxis methyl-accepting proteins.
  
  
 0.598
MotA
Flagellar motor component.
  
 
 0.587
MotB
Flagellar motor protein.
  
 
 0.582
FliY
Flagellum motor switch protein.
  
  
 0.539
PolA-2
DNA polymerase I - 3'-5' exonuclease and polymerase domains.
  
  
 0.519
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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