STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0111Uncharacterized protein conserved in bacteria. (260 aa)    
Predicted Functional Partners:
PTH_1303
Hypothetical protein; Containing COG1431, Uncharacterized protein containing piwi/argonaute domain.
  
     0.766
PTH_1829
Hypothetical protein.
  
     0.744
PTH_1171
Hypothetical membrane protein.
  
     0.670
RplY
Ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
       0.563
PTH_1631
Hypothetical protein.
  
     0.543
PTH_1786
Hypothetical signaling protein; Containing forkhead associated domain (FHA) (COG1716).
  
     0.530
PTH_2017
Superfamily II RNA helicase, superfamily II RNA helicase.
  
     0.495
PTH_1057
Hypothetical protein.
 
    0.487
PTH_2839
Hypothetical membrane protein.
  
     0.486
PTH_2889
Hypothetical protein.
  
     0.461
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.