STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0154Uncharacterized conserved protein. (363 aa)    
Predicted Functional Partners:
PTH_0153
Hypothetical protein.
 
   
 0.955
PTH_0155
Hypothetical membrane protein.
       0.786
PTH_0152
Restriction endonuclease.
       0.582
Mod
Adenine specific DNA methylase Mod.
       0.558
PTH_0156
Hypothetical membrane protein.
       0.499
PTH_0157
Hypothetical membrane protein.
       0.477
PTH_0158
Predicted ATPase.
       0.477
PTH_1639
Hypothetical protein.
 
     0.457
MazF-2
Growth inhibitor.
  
     0.452
PTH_0150
Hypothetical protein.
       0.403
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.