STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0163Hypothetical protein. (347 aa)    
Predicted Functional Partners:
VirD4
Type IV secretory pathway, VirD4 components.
 
 
 
 0.836
PTH_2099
Predicted nucleotidyltransferases.
  
     0.599
NadC-2
Nicotinate-nucleotide pyrophosphorylase.
  
     0.571
PTH_0194
Hypothetical membrane protein.
  
     0.552
PTH_0478
Hypothetical protein; Containing ferredoxin (COG1146).
  
     0.540
PTH_2511
Transposase and inactivated derivatives.
  
    0.485
PTH_1988
Hypothetical protein.
  
     0.481
PTH_0180
Hypothetical protein.
  
     0.464
vapC-2
Predicted nucleic acid-binding protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.457
PTH_0485
Hypothetical protein; Containing MoCF_biosynth, Probable molybdopterin binding domain.
  
     0.453
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.