Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0188Hypothetical membrane protein. (139 aa)    
Predicted Functional Partners:
FtsQ
Cell division septal protein; Essential cell division protein.
 
 
 
 0.924
CsgD
DNA-binding HTH domain-containing proteins.
       0.810
FtsW-2
Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 
 
 0.794
FtsW
Bacterial cell division membrane protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
   
 
 0.760
FtsW-3
Bacterial cell division membrane protein; Belongs to the SEDS family.
   
 
 0.760
FtsI-4
Cell division protein FtsI/penicillin-binding protein 2; With 2x PASTA domain.
 
 
 0.705
VacB
Predicted RNA binding protein; Contains ribosomal protein S1 domain.
  
  
 0.697
FtsI-2
Cell division protein; FtsI/penicillin-binding protein 2.
 
 
 0.670
PTH_2516
Hypothetical protein.
  
     0.629
FtsI
Cell division protein; FtsI/penicillin-binding protein 2.
  
 
 0.620
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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