STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0188Hypothetical membrane protein. (139 aa)    
Predicted Functional Partners:
FtsQ
Cell division septal protein; Essential cell division protein.
 
 
 
 0.905
CsgD
DNA-binding HTH domain-containing proteins.
       0.810
VacB
Predicted RNA binding protein; Contains ribosomal protein S1 domain.
  
  
 0.705
PTH_2516
Hypothetical protein.
  
     0.629
PTH_0190
Hypothetical protein; Partial GppA (COG0248), Exopolyphosphatase.
  
  
 0.605
PTH_2901
Hypothetical protein.
  
     0.576
PspA
Suppresse phage shock protein A; (IM30), sigma54-dependent transcription.
  
     0.538
FtsI-4
Cell division protein FtsI/penicillin-binding protein 2; With 2x PASTA domain.
 
 
 0.518
PTH_0125
Hypothetical membrane protein.
 
    0.510
PTH_1616
Hypothetical membrane protein.
  
     0.497
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.