Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SdhASuccinate dehydrogenase/fumarate reductase, flavoprotein subunit. (560 aa)    
Predicted Functional Partners:
PTH_0240
Ferredoxin.
 
 
 0.995
MET3
ATP sulfurylase; Sulfate adenylyltransferase; Belongs to the sulfate adenylyltransferase family.
 
 
 0.991
CysC
Adenylylsulfate kinase and related kinases; Catalyzes the synthesis of activated sulfate.
    
 0.978
DsrA
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.974
NuoF-3
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
  
 
 0.965
SdhC
Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
  
 0.952
PTH_0690
Hypothetical membrane protein.
  
  
 0.939
SdhB-2
Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.
 
 0.939
PTH_0691
Hypothetical protein.
 
  
 0.936
SdhB
Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.
 
 0.929
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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