STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0252ATP-utilizing enzymes; PP-loop superfamily. (269 aa)    
Predicted Functional Partners:
PurE
NCAIR mutase (PurE)-related proteins.
  
 0.958
PTH_2630
Hypothetical protein.
  
 0.942
PTH_2911
Uncharacterized conserved protein.
  
 0.891
MesJ-2
Predicted ATPase; PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family.
 
    0.603
MET17
O-acetylhomoserine sulfhydrylase.
  
    0.592
MET2
Homoserine acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
       0.552
PTH_0251
Hypothetical protein; Containing partial UbiE (COG2226), methylase involved in ubiquinone/menaquinone biosynthesis.
       0.539
TrmU
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
    
 0.534
CbiM
ABC-type Co2+ transport system, permease component; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
    0.512
CbiM-2
ABC-type Co2+ transport system, permease component.
  
    0.512
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.