STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0364Predicted nucleic acid-binding protein; Contains PIN domain. (137 aa)    
Predicted Functional Partners:
PTH_0363
Hypothetical regulator protein.
       0.776
PTH_1988
Hypothetical protein.
  
     0.712
TolC
Outer membrane protein.
  
     0.688
PTH_2560
Predicted nucleic acid-binding protein; Contains PIN domain.
  
     0.676
PTH_0800
Hypothetical protein.
  
     0.551
PTH_2798
Hypothetical serine protease; Containing Peptidase_S8, Subtilase family.
  
     0.528
PTH_0368
Hypothetical protein.
 
     0.498
VirD4
Type IV secretory pathway, VirD4 components.
  
     0.470
AmiC
N-acetylmuramoyl-L-alanine amidase.
       0.455
PTH_0365
Transposase IS3/IS911.
       0.450
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.