STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0380Carbonic anhydrases/acetyltransferases; Isoleucine patch superfamily. (190 aa)    
Predicted Functional Partners:
WecB
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 
 0.979
WecB-2
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 
 0.934
WecC
UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
   
 0.882
MviM-2
Predicted dehydrogenases and related proteins.
  
 0.866
MviM
Predicted dehydrogenases and related proteins.
  
  
 0.805
WcaA
Glycosyltransferases; Involved in cell wall biogenesis.
  
  
 0.794
PTH_0383
Uncharacterized protein conserved in archaea.
 
    0.780
WecE-2
Predicted pyridoxal phosphate-dependent enzyme; Involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.771
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.771
RfaG-7
Glycosyltransferase.
  
  
 0.705
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.