STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0419Hypothetical membrane protein; Containing three S-layer homology SLH) domains. (458 aa)    
Predicted Functional Partners:
PTH_0168
Hypothetical membrane protein.
 
 
 
 0.794
PTH_2790
Hypothetical protein.
 
  
 0.786
PTH_2496
Hypothetical membrane protein.
 
   
 0.776
PTH_2788
Hypothetical protein.
  
    0.774
PTH_2778
Hypothetical protein; Containing partial WcaK (COG2327), uncharacterized conserved protein.
  
     0.773
PTH_0933
Hypothetical membrane protein.
  
     0.769
PTH_0764
Hypothetical membrane protein.
 
   
 0.767
PTH_2339
Hypothetical protein.
  
     0.767
PTH_0265
Hypothetical membrane protein.
  
    0.751
PTH_2777
Hypothetical membrane protein.
  
     0.709
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.