STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0440Predicted methyltransferase. (273 aa)    
Predicted Functional Partners:
PTH_0131
Predicted Fe-S oxidoreductases.
 
     0.922
ArsR-2
Predicted transcriptional regulator.
 
   
 0.771
GalE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
  
 0.486
PTH_0442
Hypothetical membrane protein.
       0.471
AmiC-2
N-acetylmuramoyl-L-alanine amidase.
       0.445
SseA-2
Rhodanese-related sulfurtransferase.
  
     0.442
SseA
Rhodanese-related sulfurtransferase.
  
     0.439
SseA-3
Rhodanese-related sulfurtransferase.
  
     0.433
PTH_0976
Predicted Fe-S oxidoreductases.
 
      0.417
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.