STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GalEUDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (328 aa)    
Predicted Functional Partners:
GalT
Galactose-1-phosphate uridylyltransferase.
  
 0.978
GalU-2
UDP-glucose pyrophosphorylase.
  
 0.945
WcaG-2
Nucleoside-diphosphate-sugar epimerases.
 
0.938
WcaG-4
Nucleoside-diphosphate-sugar epimerases.
  
  
 
0.912
PTH_0442
Hypothetical membrane protein.
       0.757
WcaG-3
Nucleoside-diphosphate-sugar epimerases.
 
 
 0.671
PTH_0142
Hypothetical protein; Containing predicted ATPase (COG3899), FhlA, FOG: GAF domain (COG2203), S_TKc, serine/threonine protein kinases, catalytic domain, His Kinase A (phosphoacceptor), HATPase_c, Histidine kinase-like ATPase, REC, signal receiver domain, and ArcB, FOG: HPt domain (COG2198).
  
  
 0.589
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
 
   
 0.571
ManB-3
Phosphomannomutase.
  
 
 0.504
PTH_0440
Predicted methyltransferase.
  
  
 0.486
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.