STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IclR-2Transcriptional regulator. (263 aa)    
Predicted Functional Partners:
DUR1
Allophanate hydrolase subunit 1.
  
    0.662
FadR
Transcriptional regulator.
 
  
 0.659
PTH_1187
Hypothetical protein.
  
    0.632
PTH_0478
Hypothetical protein; Containing ferredoxin (COG1146).
 
     0.616
FadR-2
Transcriptional regulator.
 
  
 0.595
PTH_0479
Hypothetical protein.
       0.545
PTH_0481
2-keto-4-pentenoate hydratase.
 
  
 0.524
NadC-2
Nicotinate-nucleotide pyrophosphorylase.
  
    0.518
AraH
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  
     0.487
DctP
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
   
 0.455
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.