STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OtsBTrehalose-6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (263 aa)    
Predicted Functional Partners:
OtsA
Trehalose-6-phosphate synthase.
 
 0.999
GlgB
1,4-alpha-glucan branching enzyme.
 
 0.968
RfaG-12
Glycosyltransferase.
 
 0.957
GDB1
Glycogen debranching enzyme.
 
  
 0.859
RfaG-3
Glycosyltransferase.
 
 
 0.835
RpoN
DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.
   
    0.691
PTH_0095
Hypothetical protein; Containing partial ErfK (COG1376), Uncharacterized protein conserved in bacteria and partial LytE (COG1388), FOG: LysM repeat.
   
  
 0.621
TreY
Maltooligosyl trehalose synthase.
 
  
 0.578
PrkA
Putative Ser protein kinase.
   
    0.520
GlgP
Glucan phosphorylase.
   
 
 0.471
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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