STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0563Hypothetical protein. (270 aa)    
Predicted Functional Partners:
CDA1
Predicted xylanase/chitin deacetylase.
 
    
 0.907
PTH_1880
Hypothetical membrane protein; Containing CDA1 region (COG0726).
 
    
 0.901
PTH_0473
Hypothetical membrane protein; Containing Polysacc_deac_1, Polysaccharide deacetylase.
 
    
 0.774
PTH_0562
Hypothetical membrane protein.
 
  
 0.550
PblB
Phage-related protein.
 
    0.530
PTH_0765
Hypothetical signaling protein; Containing TolB (COG0823), periplasmic component of the Tol biopolymer transport system.
 
    0.492
PTH_1590
Hypothetical membrane protein.
  
     0.471
PTH_2177
RTX toxins and related Ca2+-binding proteins.
 
    0.458
PTH_0564
Hypothetical membrane protein.
       0.448
PTH_0419
Hypothetical membrane protein; Containing three S-layer homology SLH) domains.
 
     0.440
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.