STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TauC-3ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components. (45 aa)    
Predicted Functional Partners:
TauB-2
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
       0.773
PTH_0573
Hypothetical membrane protein.
       0.655
TauC-2
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
       0.642
TauA-2
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components.
       0.638
PTH_0577
Hypothetical protein; Containing DsrE (COG1553), uncharacterized conserved protein involved in intracellular sulfur reduction.
       0.625
HgdB
benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit; BcrC/BadD/HgdB.
       0.438
PTH_0571
Hypothetical membrabe protein.
       0.408
PTH_0569
Hypothetical protein.
       0.403
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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