Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PTH_0586Uncharacterized conserved protein; Containing NifB domain. (117 aa)    
Predicted Functional Partners:
MinD-2
MinD superfamily P-loop ATPase; Containing an inserted ferredoxin domain.
  
 0.968
Mrp
ATPase involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.963
MinD
MinD superfamily P-loop ATPase; Containing an inserted ferredoxin domain.
  
 0.942
Mrp-4
ATPase involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.924
Mrp-3
ATPase; Involved in chromosome partitioning.
 
  
 0.855
PTH_0582
Uncharacterized conserved protein; Containing NifB domain.
 
     0.851
PTH_0583
Hypothetical protein.
 
     0.827
PTH_0588
Predicted DNA-binding proteins; Belongs to the UPF0251 family.
 
    0.818
PTH_0661
Uncharacterized conserved protein.
 
     0.474
PTH_2806
Hypothetical transcriptional regulator; Containing effector domain of the CAP family of transcription factors, Sigma-54 interaction domain and partial NapH (COG0348), Polyferredoxin.
  
  
 0.465
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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