Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AtoCResponse regulator; Containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (515 aa)    
Predicted Functional Partners:
RpoN
DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.
 
  
 0.798
PTH_0142
Hypothetical protein; Containing predicted ATPase (COG3899), FhlA, FOG: GAF domain (COG2203), S_TKc, serine/threonine protein kinases, catalytic domain, His Kinase A (phosphoacceptor), HATPase_c, Histidine kinase-like ATPase, REC, signal receiver domain, and ArcB, FOG: HPt domain (COG2198).
  
 
 0.734
FliY
Flagellum motor switch protein.
  
  
 0.685
PTH_2640
Containing FhlA (COG2203), FOG: GAF domain and partial COG4191, signal transduction histidine kinase regulating C4-dicarboxylate transport system.
 
 
 
 0.679
PTH_1422
Hypothetical membrane protein; Containing AtoS (COG2202), FOG: PAS/PAC domain, NtrB (COG3852), signal transduction histidine kinase, nitrogen specific and PAS domain.
 
 
 0.652
NtrB-2
Signal transduction histidine kinase; Nitrogen specific.
 
 0.622
BaeS-4
Signal transduction histidine kinase.
  
 
 0.617
FliM
Flagellar motor switch protein.
  
  
 0.610
PTH_2070
ATPase; Involved in chromosome partitioning.
  
 
 0.585
BaeS-3
Signal transduction histidine kinase.
 
 
 0.564
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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