Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RfaG-4Glycosyltransferase. (431 aa)    
Predicted Functional Partners:
Cof
Predicted hydrolase; HAD superfamily.
 
 
 0.989
KamA
Lysine 2,3-aminomutase.
       0.773
PTH_2228
Uncharacterized conserved protein; Belongs to the glycosyl hydrolase 57 family.
 
 
  
 0.648
RfaG-9
Glycosyltransferase.
  
     0.640
GlgB
1,4-alpha-glucan branching enzyme.
  
 0.540
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.484
MalQ
4-alpha-glucanotransferase.
 
    
 0.463
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.