STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AmtBAmmonia permease. (472 aa)    
Predicted Functional Partners:
GlnK
Nitrogen regulatory protein PII.
 
 0.999
GltB-2
Glutamate synthase domain 2.
 
  
 0.883
GlnA
Glutamine synthetase.
  
  
 0.635
GlnA-3
Glutamine synthetase.
  
  
 0.635
GlnA-4
Glutamine synthetase.
  
  
 0.635
GlnA-5
Glutamine synthetase.
  
  
 0.635
GlnA-6
Glutamine synthetase.
  
  
 0.635
GlnA-2
Glutamine synthetase.
  
  
 0.634
BaeS-3
Signal transduction histidine kinase.
 
 0.609
nadE
Hypothetical protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.608
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.