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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0668Iron only hydrogenase large subunit, C-terminal domain; Containig ferredoxin. (530 aa)    
Predicted Functional Partners:
NuoF-3
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
   
 
 0.932
NuoF
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
 
 
 0.931
NuoF-2
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
  
 
 0.877
PTH_0982
Predicted GTPase.
 
   
 0.766
BioB-3
Biotin synthase and related enzymes.
 
  
 0.765
BioB
Biotin synthase and related enzymes.
 
  
 0.761
MmcM
Related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
     
 0.727
ThiH-4
Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes.
 
     0.672
NuoE-2
NADH:ubiquinone oxidoreductase, 24 kD subunit.
 
 
 0.640
HybA
Fe-S-cluster-containing hydrogenase components 1.
     
 0.637
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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