Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTH_0668Iron only hydrogenase large subunit, C-terminal domain; Containig ferredoxin. (530 aa)    
Predicted Functional Partners:
NuoF-3
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
   
 
 0.948
NuoF
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
 
 
 0.929
NuoF-2
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
   
 
 0.895
PTH_0982
Predicted GTPase.
 
   
 0.770
BioB-3
Biotin synthase and related enzymes.
 
  
 0.750
BioB
Biotin synthase and related enzymes.
 
  
 0.746
MmcM
Related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
     
 0.694
ThiH-4
Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes.
 
   
 0.675
HybA
Fe-S-cluster-containing hydrogenase components 1.
     
 0.635
PTH_0670
Hypothetical protein.
     
 0.613
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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