STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0672Hypothetical membrane protein. (356 aa)    
Predicted Functional Partners:
RpoE-2
DNA-directed RNA polymerase specialized sigma subunit; Sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.887
RpoE-3
DNA-directed RNA polymerase specialized sigma subunit; Sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.524
RpoE-4
DNA-directed RNA polymerase specialized sigma subunit; Sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.524
RpoE-6
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.524
RpoE-7
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.524
RpoE-9
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.524
RpoE-10
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.524
CsgD
DNA-binding HTH domain-containing proteins.
  
 
 0.515
RpoE
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family.
  
 
 0.515
RpoE-5
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
  
 
 0.515
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.