STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AtoC-2Response regulator; Containing CheY-like receiver, AAA-type ATPase and DNA-binding domains. (545 aa)    
Predicted Functional Partners:
RpoN
DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.
 
  
 0.798
PTH_0142
Hypothetical protein; Containing predicted ATPase (COG3899), FhlA, FOG: GAF domain (COG2203), S_TKc, serine/threonine protein kinases, catalytic domain, His Kinase A (phosphoacceptor), HATPase_c, Histidine kinase-like ATPase, REC, signal receiver domain, and ArcB, FOG: HPt domain (COG2198).
  
 
 0.734
PTH_2640
Containing FhlA (COG2203), FOG: GAF domain and partial COG4191, signal transduction histidine kinase regulating C4-dicarboxylate transport system.
 
 
 
 0.725
PTH_1422
Hypothetical membrane protein; Containing AtoS (COG2202), FOG: PAS/PAC domain, NtrB (COG3852), signal transduction histidine kinase, nitrogen specific and PAS domain.
 
 
 0.700
NtrB-2
Signal transduction histidine kinase; Nitrogen specific.
 
 0.695
FliY
Flagellum motor switch protein.
  
  
 0.685
BaeS-3
Signal transduction histidine kinase.
 
 
 0.620
BaeS-4
Signal transduction histidine kinase.
  
 
 0.617
BaeS-2
Signal transduction histidine kinase.
 
 
 
 0.611
FliM
Flagellar motor switch protein.
  
  
 0.610
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.