STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0680Hypothetical protein; Containing GlpC (COG0247), Fe-S oxidoreductase and partial GltD (COG0493), NADPH-dependent glutamate synthase beta chain and related oxidoreductases. (776 aa)    
Predicted Functional Partners:
GltB-2
Glutamate synthase domain 2.
 
 
 0.999
PTH_0681
Hypothetical protein.
 
     0.961
NuoF-3
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
  
 
 0.952
NuoF
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
  
 
 0.943
PTH_0684
Predicted Fe-S oxidoreductases.
 
     0.935
NuoF-2
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
  
 
 0.927
PTH_0679
Aerobic-type carbon monoxide dehydrogenase; Containing COG1229 CoxL and COG2080 CoxS.
 
   
 0.923
PTH_0682
Hypothetical protein.
 
  
 0.919
PTH_0683
Hypothetical membrane protein.
 
     0.916
PTH_0687
Hypothetical protein.
 
    0.912
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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