STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PaaK-3Coenzyme F390 synthetase. (447 aa)    
Predicted Functional Partners:
PTH_0683
Hypothetical membrane protein.
 
     0.947
PTH_0684
Predicted Fe-S oxidoreductases.
 
     0.946
PTH_0682
Hypothetical protein.
 
  
 0.945
PTH_0681
Hypothetical protein.
 
     0.912
PTH_0680
Hypothetical protein; Containing GlpC (COG0247), Fe-S oxidoreductase and partial GltD (COG0493), NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 
     0.909
XdhC
Xanthine and CO dehydrogenases maturation factor; XdhC/CoxF family.
     0.900
PTH_0687
Hypothetical protein.
 
     0.876
PTH_0679
Aerobic-type carbon monoxide dehydrogenase; Containing COG1229 CoxL and COG2080 CoxS.
 
   
 0.856
CaiC-2
acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
     
 0.742
CaiC-4
acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
     
 0.742
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.