STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0691Hypothetical protein. (443 aa)    
Predicted Functional Partners:
PTH_0690
Hypothetical membrane protein.
 
 0.996
PTH_0240
Ferredoxin.
 
 
  0.946
SdhA
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
  
 0.936
DsrA
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.913
CysK
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.902
DsrC
Dissimilatory sulfite reductase (desulfoviridin), gamma subunit.
 
 
 
 0.867
PTH_2234
Uncharacterized conserved protein; Containing a ferredoxin-like domain.
 
 
 0.802
PTH_2235
Uncharacterized conserved protein.
 
 
 0.764
RnfC
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC.
  
 
 0.545
PTH_2644
Hypothetical protein; Containing partial COG1139, uncharacterized conserved protein containing a ferredoxin-like domain.
  
 
 0.527
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.