Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0705Uncharacterized conserved protein. (81 aa)    
Predicted Functional Partners:
PTH_0694
Predicted nucleic acid-binding protein; Contains PIN domain.
  
     0.700
PTH_2698
Predicted nucleic acid-binding protein; Contains PIN domain.
  
     0.700
PTH_1988
Hypothetical protein.
  
     0.691
PTH_2783
Predicted nucleic acid-binding protein; Contains PIN domain.
  
     0.649
PTH_0403
Predicted nucleic acid-binding protein; Contains PIN domain.
  
   
 0.617
VapC
Predicted nucleic acid-binding protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   
 0.613
PTH_2586
Uncharacterized conserved protein.
  
     0.532
PTH_2206
Uncharacterized conserved protein.
  
     0.523
Uma2
Uncharacterized protein conserved in cyanobacteria.
  
     0.511
Uma2-3
Uncharacterized protein conserved in cyanobacteria.
  
     0.510
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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