STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0706Hypothetical protein. (1226 aa)    
Predicted Functional Partners:
PTH_0715
Hypothetical protein.
 
     0.838
PTH_0717
Hypothetical protein.
 
     0.808
PTH_0716
Hypothetical DNA/RNA helicase; Containing partial HepA (COG0553), superfamily II DNA/RNA helicases, SNF2 family.
 
   0.805
PolA
DNA polymerase I - 3'-5' exonuclease and polymerase domains; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.632
PTH_0707
Hypothetical protein; Containing partial COG1367, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).
       0.631
PTH_0708
Hypothetical protein; Containing partial COG1604, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).
       0.631
PTH_0709
Hypothetical protein.
       0.631
RnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
  
 0.483
PTH_0160
Hypothetical protein.
 
 
   0.468
PTH_0858
Hypothetical protein; Containing superfamily II DNA/RNA helicases region (COG0553 HepA).
 
   0.468
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.