STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0708Hypothetical protein; Containing partial COG1604, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily). (364 aa)    
Predicted Functional Partners:
PTH_0709
Hypothetical protein.
   
 
 0.941
PTH_0707
Hypothetical protein; Containing partial COG1367, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).
   
 
 0.849
PTH_1924
Uncharacterized protein; Predicted to be involved in DNA repair.
   
 
 0.761
PTH_1928
Predicted hydrolase; HD superfamily (permuted catalytic motifs).
   
 
 0.749
PTH_0712
Uncharacterized protein; Predicted to be involved in DNA repair (RAMP superfamily).
   
 
 0.696
PTH_1925
Uncharacterized protein; Predicted to be involved in DNA repair (RAMP superfamily).
   
 
 0.696
PTH_0706
Hypothetical protein.
       0.631
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.