STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD55-2RecA-superfamily ATPase; Implicated in signal transduction. (239 aa)    
Predicted Functional Partners:
RAD55
RecA-superfamily ATPase; Implicated in signal transduction.
 
    
0.838
PTH_0750
Hypothetical protein; Containing predicted hydrocarbon binding protein (contains V4R domain) resion (COG1719).
       0.773
PTH_0751
Hypothetical protein.
       0.773
NtrB-2
Signal transduction histidine kinase; Nitrogen specific.
       0.741
PTH_2396
Transposase and inactivated derivatives.
  
     0.595
PTH_0863
Predicted ATPase; AAA+ superfamily.
  
     0.556
PTH_2403
Predicted ATPase; AAA+ superfamily.
  
     0.554
PTH_2404
Adenine-specific DNA methylase; Containing a Zn-ribbon.
  
     0.554
PTH_0860
Adenine-specific DNA methylase; Containing a Zn-ribbon.
  
     0.524
PTH_1997
Hypothetical protein.
  
     0.512
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.