Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NtrB-2Signal transduction histidine kinase; Nitrogen specific. (349 aa)    
Predicted Functional Partners:
CheY
FOG: CheY-like receiver.
 
 
 0.851
OmpR-7
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 
 0.818
OmpR-6
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 
 0.816
CheY-3
FOG: CheY-like receiver.
  
     0.774
PTH_0142
Hypothetical protein; Containing predicted ATPase (COG3899), FhlA, FOG: GAF domain (COG2203), S_TKc, serine/threonine protein kinases, catalytic domain, His Kinase A (phosphoacceptor), HATPase_c, Histidine kinase-like ATPase, REC, signal receiver domain, and ArcB, FOG: HPt domain (COG2198).
 
0.767
CheR
Methylase of chemotaxis methyl-accepting proteins.
    
 0.766
OmpR
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 
 0.753
OmpR-8
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 
 0.745
AtoC-3
Response regulator; Containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 
 0.743
RAD55
RecA-superfamily ATPase; Implicated in signal transduction.
       0.741
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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