STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0759Uncharacterized vancomycin resistance protein. (455 aa)    
Predicted Functional Partners:
PTH_0758
Hypothetical protein; Containing uncharacterized conserved region (COG3881).
       0.755
PTH_0757
Hypothetical membrane protein; Containing uncharacterized conserved region (COG2456).
       0.741
PTH_2281
Beta-glucosidase-related glycosidases and D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
     
 0.448
PTH_0756
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
       0.436
PTH_2171
Uncharacterized protein; With SCP/PR1 domains.
  
     0.411
PTH_1322
Uncharacterized protein; With SCP/PR1 domains.
  
     0.400
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.