Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PTH_0766Hypothetical transmembrane transport protein. (410 aa)    
Predicted Functional Partners:
PTH_0767
Hypothetical protein.
       0.773
PTH_0142
Hypothetical protein; Containing predicted ATPase (COG3899), FhlA, FOG: GAF domain (COG2203), S_TKc, serine/threonine protein kinases, catalytic domain, His Kinase A (phosphoacceptor), HATPase_c, Histidine kinase-like ATPase, REC, signal receiver domain, and ArcB, FOG: HPt domain (COG2198).
      
 0.480
PTH_0772
Hypothetical membrane protein.
     
 0.442
GltB-2
Glutamate synthase domain 2.
      
 0.439
RpoE-3
DNA-directed RNA polymerase specialized sigma subunit; Sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.434
PTH_0770
Hypothetical membrane protein.
     
 0.422
CcmA-2
ABC-type multidrug transport system, ATPase component.
     
 0.422
PTH_0769
Hypothetical membrane protein.
       0.421
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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