STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0772Hypothetical membrane protein. (281 aa)    
Predicted Functional Partners:
CcmA-2
ABC-type multidrug transport system, ATPase component.
 
 
 0.976
PTH_0770
Hypothetical membrane protein.
 
    0.962
PTH_0769
Hypothetical membrane protein.
 
     0.928
RpoE-3
DNA-directed RNA polymerase specialized sigma subunit; Sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.831
PspA
Suppresse phage shock protein A; (IM30), sigma54-dependent transcription.
  
     0.607
CcmA-3
ABC-type multidrug transport system, ATPase component.
  
 
 0.572
CcmA-4
ABC-type multidrug transport system, ATPase component.
  
 
 0.572
CcmA-5
ABC-type multidrug transport system, ATPase component.
  
 
 0.572
CcmA-6
ABC-type multidrug transport system, ATPase component.
  
 
 0.572
CcmA-7
ABC-type multidrug transport system, ATPase component.
  
 
 0.572
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.