STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CcmA-3ABC-type multidrug transport system, ATPase component. (323 aa)    
Predicted Functional Partners:
TagG
ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
 0.961
PTH_1514
ABC-type multidrug transport system, permease component.
  
 0.950
PTH_2804
ABC-type multidrug transport system, permease component.
  
 0.823
MarR-3
Transcriptional regulator.
  
  
 0.777
PTH_0772
Hypothetical membrane protein.
  
 
 0.775
PTH_1475
ABC-type multidrug transport system, permease component.
 
  
 0.768
LivM-2
ABC-type branched-chain amino acid transport system, permeasecomponent; Belongs to the binding-protein-dependent transport system permease family.
 
      0.730
LivM
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
      0.708
SalY
ABC-type antimicrobial peptide transport system, permease component.
 
    
 0.697
TagG-2
ABC-type polysaccharide/polyolphosphate export systems, permeasecomponent.
 
  
 0.685
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.